miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|83279553|gb|DV943561.1|DV943561 AGCAAGATGGCTGCGGGTGTACTGGGCGGCTTCGGCCAAAAACTGCTTACTGCTGCCTTCTGCGGCGGCTCTCGTGGCTT
CATAAAGAACGCTGCTGCTGGTTACTATGCCAACCGTGGAGGAGCCACTTGGGCACCAGATTATGAATGGATCAAGCAGT
TTGAGGGTCCAATTCTTCTGCCCCCGGAAGAGCAGGACAATCTTCCACCACCTCTTTGGATGCAGAGGAAACCCCCGTTT
GAGAAAAAGATTCGCAACGTAACCATCAACTTTGGTCCCCAGCACCCAGCAGCCCACGGTGTGCTGAGGCTGGTGCTGGA
GCTGGATGGTGAGACTGTGATGCGTGCAGATCCCCACATTGGGCTGCTGCACCGAGGAACAGAGAAGCTCATTGAATACA
AGACATACACGCAGGCTCTTCCATACTTTGACCGTCTTGACTATGTGTCCATGATGTGCAATGAACAGGCATATTCGCTG
GCTGTGGAGAAACTGCTCGGCCTGGAGGCTCCCATCAGGGCCAAGTACATCCGTACCATGTTTGCTGAGGTTACACGCAT
CTTGAATCACTGCATGTTCTTGGGGGCTCACGCTATGGATGTGGGCGCCCTCACTCCTTTCCTGTGGCTCTTTGAGGAAC
GTGAGAAGATGATGGAGTTCTATGAGAGAGCTTCTGGTGCTCGCCTTCATGCAGCCTACGTTCGTCCT




Most similar to sp|Q0MQG3|NDUS2_PONPY

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9ZWQ8|PAP_CITUN Plastid-lipid-associated protein, chloroplastic
           OS=Citrus unshiu GN=PAP PE=2 SV=1
          Length = 323

 Score =  488 bits (1257), Expect(2) = e-156
 Identities = 257/277 (92%), Positives = 257/277 (92%)
 Frame = +3

Query: 42  MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 221
           MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV
Sbjct: 1   MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 60

Query: 222 LTRAADDDXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSET 401
           LTRAADDD                    SPKEVTEIDNLKKALVDSFYGTDRGLNATSET
Sbjct: 61  LTRAADDDEWGPEKEKEGGGALAVAEEESPKEVTEIDNLKKALVDSFYGTDRGLNATSET 120

Query: 402 RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQ 581
           RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQ
Sbjct: 121 RAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQ 180

Query: 582 TIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPE 761
           TIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPE
Sbjct: 181 TIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPE 240

Query: 762 NVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPP 872
           NVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPP
Sbjct: 241 NVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPP 277



 Score = 84.7 bits (208), Expect(2) = e-156
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +1

Query: 877  KFSISNSNAQSWVLTTYLDEDLRISRADAGSVFVFIREGSPLL 1005
            KFSISNSNAQSW+LTTYLDEDLRISRADAGSVFVFI+EGSPLL
Sbjct: 279  KFSISNSNAQSWLLTTYLDEDLRISRADAGSVFVFIKEGSPLL 321


>sp|P80471|LIPC_SOLTU Light-induced protein, chloroplastic
           OS=Solanum tuberosum PE=1 SV=2
          Length = 326

 Score =  352 bits (903), Expect(2) = e-111
 Identities = 187/280 (66%), Positives = 214/280 (76%), Gaps = 3/280 (1%)
 Frame = +3

Query: 42  MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 221
           MASIS  NQ PCKTL     +++ TSK S LP++S            +S++ FT  +P  
Sbjct: 1   MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFPSKTELHRSISVKEFTNPKPKF 60

Query: 222 LTRAAD---DDXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNAT 392
             +A +   +D                     PKE +EI+ LKK L DS YGT+RGL+A+
Sbjct: 61  TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS 120

Query: 393 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 572
           SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEE
Sbjct: 121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEE 180

Query: 573 ISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLV 752
           ISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEG+IGTPQ+TDS+V
Sbjct: 181 ISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIV 240

Query: 753 LPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPP 872
           LPENVEFLGQKIDLSPFKG+++SVQDTASSVAK+ISSQPP
Sbjct: 241 LPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPP 280



 Score = 73.9 bits (180), Expect(2) = e-111
 Identities = 34/43 (79%), Positives = 40/43 (93%)
 Frame = +1

Query: 877  KFSISNSNAQSWVLTTYLDEDLRISRADAGSVFVFIREGSPLL 1005
            KF I+N+NAQSW+LTTYLD++LRISR DAGSVFV I+EGSPLL
Sbjct: 282  KFPITNNNAQSWLLTTYLDDELRISRGDAGSVFVLIKEGSPLL 324


>sp|O99019|LIPC_SOLDE Light-induced protein, chloroplastic
           OS=Solanum demissum PE=1 SV=1
          Length = 326

 Score =  350 bits (898), Expect(2) = e-110
 Identities = 185/280 (66%), Positives = 214/280 (76%), Gaps = 3/280 (1%)
 Frame = +3

Query: 42  MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSVRISRSLAKKSFLSIQGFTRARPLV 221
           MASIS  NQ PCKTL     +++ TSK S LP++S        +   +S++ FT  +P  
Sbjct: 1   MASISSLNQIPCKTLQITSQYSKPTSKISTLPISSTNFLSKTEQHRSISVKEFTNPKPKF 60

Query: 222 LTRAAD---DDXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNAT 392
             +A +   +D                     PKE +EI+ LKK L DS YGT+RGL+A+
Sbjct: 61  TAQATNYDKEDEWGPEVEQIRPGGVAVVEEEPPKEPSEIELLKKQLADSLYGTNRGLSAS 120

Query: 393 SETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEE 572
           SETRAEIVELITQLE+KNP PAPTEALTLLN KWIL YTSFSGLFPLLSRG LPL RVEE
Sbjct: 121 SETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNLPLVRVEE 180

Query: 573 ISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLV 752
           ISQTIDSE+FTVQNS+ FAGPLATTSISTNAKFEVRSPKRVQIKFEEG+IGTPQ+TDS+V
Sbjct: 181 ISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTPQLTDSIV 240

Query: 753 LPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPP 872
           LPENVEFLGQKID+SPFKG+++SVQDTASSV K+ISSQPP
Sbjct: 241 LPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPP 280



 Score = 72.0 bits (175), Expect(2) = e-110
 Identities = 33/43 (76%), Positives = 39/43 (90%)
 Frame = +1

Query: 877  KFSISNSNAQSWVLTTYLDEDLRISRADAGSVFVFIREGSPLL 1005
            KF I+N+NAQSW+LTTYLD++LRI R DAGSVFV I+EGSPLL
Sbjct: 282  KFPITNNNAQSWLLTTYLDDELRIPRGDAGSVFVLIKEGSPLL 324


>sp|Q96398|CHRC_CUCSA Chromoplast-specific carotenoid-associated
           protein, chromoplast OS=Cucumis sativus GN=CHRC PE=1
           SV=1
          Length = 322

 Score =  341 bits (874), Expect(2) = e-106
 Identities = 181/278 (65%), Positives = 214/278 (76%), Gaps = 1/278 (0%)
 Frame = +3

Query: 42  MASISQTNQFPCKTLSQNPPHNQFTSKPSILPLNSV-RISRSLAKKSFLSIQGFTRARPL 218
           MA +SQ NQ PCKTL+ NPP  Q TSKPS+ P+ S+   +R+ A KS +S++   + R +
Sbjct: 1   MAFVSQFNQLPCKTLALNPPQPQLTSKPSVFPIASIGATARAAAGKSLISVRPAFKVRAV 60

Query: 219 VLTRAADDDXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSE 398
           +      +D                     P E +EI  LKKALVDSFYGTDRGL  + +
Sbjct: 61  LNDDEWGEDKDEKYGDDSSVAVAEKEEE-KPLEPSEIYKLKKALVDSFYGTDRGLRVSRD 119

Query: 399 TRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEIS 578
           TRAEIVELITQLE+KNPTPAPTEALTLLN KWIL YT+F+GLFPLLSR  LPL +VEEIS
Sbjct: 120 TRAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPLLSRN-LPLVKVEEIS 178

Query: 579 QTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLP 758
           QTIDSEN TVQNS+QF+GPLATTSI+TNAKFEVRSP RV IKFEEGVIGTPQ+TDS+V+P
Sbjct: 179 QTIDSENLTVQNSVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGTPQLTDSIVIP 238

Query: 759 ENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPP 872
           +NV+FLGQKID +PF GI+SS+QDTAS+VAKTISSQPP
Sbjct: 239 DNVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPP 276



 Score = 67.8 bits (164), Expect(2) = e-106
 Identities = 31/43 (72%), Positives = 36/43 (83%)
 Frame = +1

Query: 877  KFSISNSNAQSWVLTTYLDEDLRISRADAGSVFVFIREGSPLL 1005
            KFSISN+  +SW+LTTYLDEDLRISR D GSVFV ++EGS  L
Sbjct: 278  KFSISNTRVESWLLTTYLDEDLRISRGDGGSVFVLLKEGSSFL 320


>sp|Q94KU6|PAP2_BRACM Plastid lipid-associated protein 2,
           chloroplastic OS=Brassica campestris GN=PAP2 PE=1 SV=1
          Length = 319

 Score =  310 bits (795), Expect(2) = 1e-97
 Identities = 168/279 (60%), Positives = 208/279 (74%), Gaps = 2/279 (0%)
 Frame = +3

Query: 42  MASISQTNQFPCKTLSQNPPHNQFTSKP--SILPLNSVRISRSLAKKSFLSIQGFTRARP 215
           MA++   NQFPCKT  Q+  +++  SKP  S++P++++    S     F   +   R R 
Sbjct: 1   MATVQFFNQFPCKTRVQSSANSKPLSKPPSSLVPMSALTRRPSFPPGEFAVSRSDFRVRV 60

Query: 216 LVLTRAADDDXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATS 395
           +     A+D+                       E TE+  LK++LVDS YGTDRGL+A+S
Sbjct: 61  I----DAEDELDPETSEGGGSALLMAEEAIESVEETEV--LKRSLVDSLYGTDRGLSASS 114

Query: 396 ETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEI 575
           ETRAEI +LITQLE+KNPTPAPT+AL LLN KWIL YTSF GLFPLLSRG +PL +V+EI
Sbjct: 115 ETRAEIGDLITQLESKNPTPAPTDALFLLNGKWILAYTSFVGLFPLLSRGIVPLVKVDEI 174

Query: 576 SQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVL 755
           SQTIDS+NFTV+NS+ FAGPLATTSISTNAKFE+RSPKRVQIKFEEGVIGTPQ+TDS+ +
Sbjct: 175 SQTIDSDNFTVENSVLFAGPLATTSISTNAKFEIRSPKRVQIKFEEGVIGTPQLTDSIEI 234

Query: 756 PENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPP 872
           PE VEFLGQKIDL+P +G+L+SVQDTA+SVA+TISSQPP
Sbjct: 235 PEYVEFLGQKIDLTPIRGLLTSVQDTATSVARTISSQPP 273



 Score = 68.9 bits (167), Expect(2) = 1e-97
 Identities = 31/44 (70%), Positives = 38/44 (86%)
 Frame = +1

Query: 877  KFSISNSNAQSWVLTTYLDEDLRISRADAGSVFVFIREGSPLLD 1008
            KFS+   +AQSW+LTTYLD+D+RISR D GSVFV I+EGSPLL+
Sbjct: 275  KFSLPGDSAQSWLLTTYLDKDIRISRGDGGSVFVLIKEGSPLLN 318


>sp|O49629|PAP2_ARATH Probable plastid-lipid-associated protein 2,
           chloroplastic OS=Arabidopsis thaliana GN=PAP2 PE=1 SV=1
          Length = 310

 Score =  299 bits (766), Expect(2) = 1e-94
 Identities = 163/278 (58%), Positives = 202/278 (72%), Gaps = 1/278 (0%)
 Frame = +3

Query: 42  MASISQTNQFPCKTLSQNPPHNQFTSKPSIL-PLNSVRISRSLAKKSFLSIQGFTRARPL 218
           MA++  + QF C+T     P+++  SKP  L P+ S+ I R +     +++      R +
Sbjct: 1   MATVQLSTQFSCQTRVSISPNSKSISKPPFLVPVTSI-IHRPMISTGGIAVS----PRRV 55

Query: 219 VLTRAADDDXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSE 398
              RA D                        ++V E + LK++LVDS YGTDRGL+A+SE
Sbjct: 56  FKVRATDTGEIGSALLAAEEAI---------EDVEETERLKRSLVDSLYGTDRGLSASSE 106

Query: 399 TRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEIS 578
           TRAEI +LITQLE+KNPTPAPTEAL LLN KWIL YTSF  LFPLLSRG +PL +V+EIS
Sbjct: 107 TRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIVPLIKVDEIS 166

Query: 579 QTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLP 758
           QTIDS+NFTVQNS++FAGPL T SISTNAKFE+RSPKRVQIKFE+GVIGTPQ+TDS+ +P
Sbjct: 167 QTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSIEIP 226

Query: 759 ENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPP 872
           E VE LGQKIDL+P +G+L+SVQDTASSVA+TISSQPP
Sbjct: 227 EYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPP 264



 Score = 70.1 bits (170), Expect(2) = 1e-94
 Identities = 32/44 (72%), Positives = 38/44 (86%)
 Frame = +1

Query: 877  KFSISNSNAQSWVLTTYLDEDLRISRADAGSVFVFIREGSPLLD 1008
            KFS+   NAQSW+LTTYLD+D+RISR D GSVFV I+EGSPLL+
Sbjct: 266  KFSLPADNAQSWLLTTYLDKDIRISRGDGGSVFVLIKEGSPLLN 309


>sp|O81439|PAP1_ARATH Probable plastid-lipid-associated protein 1,
           chloroplastic OS=Arabidopsis thaliana GN=PAP1 PE=1 SV=1
          Length = 318

 Score =  301 bits (770), Expect(2) = 6e-94
 Identities = 163/281 (58%), Positives = 200/281 (71%), Gaps = 4/281 (1%)
 Frame = +3

Query: 42  MASISQTNQFPCKTLSQNPPHNQFTSK-PSILPLNSVRISRSLAKKSFLSIQGFTRARPL 218
           MA++    QFPCKTL+ +  + +  SK P +LP+NS+     +         G +  RP 
Sbjct: 1   MATVPLFTQFPCKTLNPSSSNTKHQSKSPILLPINSINRRSEI---------GVSVHRPD 51

Query: 219 VLTRAADDDXXXXXXXXXXXXXXXXXXXXSPK---EVTEIDNLKKALVDSFYGTDRGLNA 389
              RA D D                    + K    V E + LK++L DS YGTDRGL+ 
Sbjct: 52  FKIRATDIDDEWGQDGVERVFASSSTVSVADKAIESVEETERLKRSLADSLYGTDRGLSV 111

Query: 390 TSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVE 569
           +S+TRAEI ELITQLE+KNPTPAP EAL LLN KWIL YTSF GLFPLLSR   PL +V+
Sbjct: 112 SSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIEPLVKVD 171

Query: 570 EISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSL 749
           EISQTIDS++FTVQNS++FAGP +TTS STNAKFE+RSPKRVQIKFE+GVIGTPQ+TDS+
Sbjct: 172 EISQTIDSDSFTVQNSVRFAGPFSTTSFSTNAKFEIRSPKRVQIKFEQGVIGTPQLTDSI 231

Query: 750 VLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPP 872
            +PE+VE LGQKIDL+P KG+L+SVQDTASSVA+TIS+QPP
Sbjct: 232 EIPESVEVLGQKIDLNPIKGLLTSVQDTASSVARTISNQPP 272



 Score = 66.2 bits (160), Expect(2) = 6e-94
 Identities = 30/44 (68%), Positives = 37/44 (84%)
 Frame = +1

Query: 877  KFSISNSNAQSWVLTTYLDEDLRISRADAGSVFVFIREGSPLLD 1008
            KFS+ + N QSW+LTTYLD+DLRISR D GSV+V I+EGS LL+
Sbjct: 274  KFSLPSDNTQSWLLTTYLDKDLRISRGDGGSVYVLIKEGSSLLN 317


>sp|Q94FZ9|PAP1_BRACM Plastid lipid-associated protein 1,
           chloroplastic OS=Brassica campestris GN=PAP1 PE=1 SV=1
          Length = 327

 Score =  285 bits (729), Expect(2) = 1e-89
 Identities = 157/273 (57%), Positives = 189/273 (69%), Gaps = 3/273 (1%)
 Frame = +3

Query: 63  NQFPCKTLSQNPPHNQFTSK-PSILPLNSVRISRSLAKKSFLSIQGFTRAR--PLVLTRA 233
           +QF CKT   +   + F SK P +LP+N +    ++ +  F            P    R 
Sbjct: 9   SQFTCKTPITSSSTSSFQSKSPILLPINPINRRIAVHRHDFKVRASDVNDEWGPDSKGRG 68

Query: 234 ADDDXXXXXXXXXXXXXXXXXXXXSPKEVTEIDNLKKALVDSFYGTDRGLNATSETRAEI 413
            D D                    + +   E + LK+ L  S YGTDRGL+A+SETRAEI
Sbjct: 69  GDVDDEWGPEIGLNSSVAEKVAEEAIESAEETERLKRVLAGSLYGTDRGLSASSETRAEI 128

Query: 414 VELITQLEAKNPTPAPTEALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDS 593
            ELITQLE+KNP PAP EAL LLN KWILVYTSF GLFPLLSR   PL +V+EISQTIDS
Sbjct: 129 SELITQLESKNPNPAPNEALFLLNGKWILVYTSFVGLFPLLSRRISPLVKVDEISQTIDS 188

Query: 594 ENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPENVEF 773
           ++FTV NS++FA PLATTS+STNAKFEVRSPKRVQ+KFE+GVIGTPQ+TDS+ +PE VE 
Sbjct: 189 DSFTVHNSVRFASPLATTSLSTNAKFEVRSPKRVQVKFEQGVIGTPQLTDSIEIPEFVEV 248

Query: 774 LGQKIDLSPFKGILSSVQDTASSVAKTISSQPP 872
           LGQKIDL+P KG+L+SVQDTASSVA+TISSQPP
Sbjct: 249 LGQKIDLNPIKGLLTSVQDTASSVARTISSQPP 281



 Score = 67.8 bits (164), Expect(2) = 1e-89
 Identities = 32/44 (72%), Positives = 37/44 (84%)
 Frame = +1

Query: 877  KFSISNSNAQSWVLTTYLDEDLRISRADAGSVFVFIREGSPLLD 1008
            KFS+   +AQSW+LTTYLD+DLRISR D GSVFV IREGS LL+
Sbjct: 283  KFSLPGDSAQSWLLTTYLDKDLRISRGDGGSVFVLIREGSSLLN 326


>sp|Q6K439|PAP2_ORYSJ Probable plastid-lipid-associated protein 2,
           chloroplastic OS=Oryza sativa subsp. japonica GN=PAP2
           PE=2 SV=1
          Length = 319

 Score =  279 bits (714), Expect(2) = 4e-85
 Identities = 139/188 (73%), Positives = 163/188 (86%), Gaps = 1/188 (0%)
 Frame = +3

Query: 321 TEIDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWIL 500
           +E+  LK  L ++ YGT+RGL A+SETRAE+VELITQLEA+NPTPAPTEALTLLN KWIL
Sbjct: 90  SEVAELKAKLKEALYGTERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWIL 149

Query: 501 VYTSFSGLFPLLSRGTLP-LARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEV 677
            YTSFS LFPLL  G+LP L +VEEISQTIDSENFTVQN I+F+GPLATTS+STNAKFEV
Sbjct: 150 AYTSFSQLFPLLGSGSLPQLVKVEEISQTIDSENFTVQNCIKFSGPLATTSVSTNAKFEV 209

Query: 678 RSPKRVQIKFEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTI 857
           RSPKRVQIKF+EG+IGTPQ+TDS+VLPE  E  GQ IDL+P KGI SS+++ ASSVA+TI
Sbjct: 210 RSPKRVQIKFDEGIIGTPQLTDSIVLPEKFELFGQNIDLTPLKGIFSSIENAASSVARTI 269

Query: 858 SSQPPXEV 881
           S QPP ++
Sbjct: 270 SGQPPLKI 277



 Score = 58.2 bits (139), Expect(2) = 4e-85
 Identities = 26/43 (60%), Positives = 32/43 (74%)
 Frame = +1

Query: 877  KFSISNSNAQSWVLTTYLDEDLRISRADAGSVFVFIREGSPLL 1005
            K  I   NA+SW+LTTYLD++LRISR D  S+FV  +EGS LL
Sbjct: 276  KIPIRTDNAESWLLTTYLDDELRISRGDGSSIFVLFKEGSTLL 318


>sp|Q7XBW5|PAP3_ORYSJ Probable plastid-lipid-associated protein 3,
           chloroplastic OS=Oryza sativa subsp. japonica GN=PAP3
           PE=3 SV=1
          Length = 374

 Score =  179 bits (454), Expect(2) = 3e-55
 Identities = 88/198 (44%), Positives = 130/198 (65%), Gaps = 7/198 (3%)
 Frame = +3

Query: 309 PKEVTEIDN-------LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTE 467
           P  V E DN       LK+ LVD+ YG+D G  A+SE R E++EL+TQLEA NPTP P +
Sbjct: 133 PPPVPEEDNEEERREELKRCLVDTVYGSDLGFRASSEVRGEVLELVTQLEATNPTPEPVQ 192

Query: 468 ALTLLNAKWILVYTSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATT 647
           A  LL   WIL+YT++S L P+L+ G  PL +V+EISQ ID+ + T+ N+   + P A+ 
Sbjct: 193 ATHLLAGNWILIYTAYSELLPILAVGAAPLFKVDEISQEIDTNSMTIVNASTISSPFASF 252

Query: 648 SISTNAKFEVRSPKRVQIKFEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQ 827
           S S  A F+V+SP R++++F+EG    P+++ S+ LP  V+  GQKI L P + +L+ +Q
Sbjct: 253 SFSATASFDVQSPSRIEVQFKEGSFQPPKISSSVDLPAEVDIFGQKISLGPVQQVLNPLQ 312

Query: 828 DTASSVAKTISSQPPXEV 881
              +S+A +IS QPP ++
Sbjct: 313 QAFASIAGSISGQPPLKL 330



 Score = 58.5 bits (140), Expect(2) = 3e-55
 Identities = 26/41 (63%), Positives = 35/41 (85%)
 Frame = +1

Query: 892  NSNAQSWVLTTYLDEDLRISRADAGSVFVFIREGSPLLDAM 1014
            N+ A+SW+LTTYLD+DLRISR D G +F+ ++EGSPLLD +
Sbjct: 335  NNRARSWLLTTYLDKDLRISRGD-GGLFILVKEGSPLLDQL 374


>sp|Q9ZP40|PG1_PEA Plastoglobulin-1, chloroplastic OS=Pisum sativum
           GN=PG1 PE=1 SV=1
          Length = 358

 Score =  182 bits (462), Expect(2) = 3e-54
 Identities = 84/185 (45%), Positives = 127/185 (68%)
 Frame = +3

Query: 327 IDNLKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVY 506
           ++ LK++LVD+ YGT+ G  A SE RAE+ E + QLEA NPTPAP E   LLN  W+L+Y
Sbjct: 132 LEGLKRSLVDTVYGTELGFRARSEVRAEVSEFVAQLEAANPTPAPVEEPDLLNGNWVLLY 191

Query: 507 TSFSGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSP 686
           T+ S L PLL+ G+LPL ++++ISQTID+++FTV NS   + P A+ S S +A FEVRSP
Sbjct: 192 TASSELLPLLAAGSLPLLKLDKISQTIDTDSFTVVNSTTLSSPFASFSFSVSASFEVRSP 251

Query: 687 KRVQIKFEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQ 866
            R+Q+ F+EG +  P++   + LPEN+   GQ++ L P    L  +++  +++++ IS Q
Sbjct: 252 TRIQVTFKEGSLQPPEIKSKIDLPENINIFGQQLSLGPLLQSLGPLENVVANISRVISGQ 311

Query: 867 PPXEV 881
            P ++
Sbjct: 312 SPLKI 316



 Score = 52.4 bits (124), Expect(2) = 3e-54
 Identities = 26/44 (59%), Positives = 30/44 (68%)
 Frame = +1

Query: 877  KFSISNSNAQSWVLTTYLDEDLRISRADAGSVFVFIREGSPLLD 1008
            K  I      SW++TTYLD+DLRISR D G +FV  REGS LLD
Sbjct: 315  KIPIPGERTSSWLITTYLDKDLRISRGD-GGLFVLAREGSSLLD 357


>sp|O82291|PAP3_ARATH Probable plastid-lipid-associated protein 3,
           chloroplastic OS=Arabidopsis thaliana GN=PAP3 PE=1 SV=1
          Length = 376

 Score =  180 bits (456), Expect(2) = 5e-53
 Identities = 87/182 (47%), Positives = 123/182 (67%)
 Frame = +3

Query: 336 LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSF 515
           LK+ L DS YGT+ G  A SE RAE++EL+ QLEA NPTPAP E   LL+  W+L+YT+F
Sbjct: 153 LKRCLADSVYGTELGFKAGSEVRAEVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAF 212

Query: 516 SGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRV 695
           S L PLL+ G+ PL +V+ ISQ+ID+ N  + NS   + P A  S S  A FEVRSP R+
Sbjct: 213 SELIPLLAAGSTPLLKVKSISQSIDTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRI 272

Query: 696 QIKFEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPX 875
           ++ F+EG +  P +  S+ LPE+V   GQ+I LS  K  L+ +QD A+++++ +S QPP 
Sbjct: 273 EVSFKEGTLKPPVIKSSVDLPESVGVFGQQISLSLLKQSLNPLQDVAANISRALSGQPPL 332

Query: 876 EV 881
           ++
Sbjct: 333 KL 334



 Score = 50.4 bits (119), Expect(2) = 5e-53
 Identities = 25/44 (56%), Positives = 30/44 (68%)
 Frame = +1

Query: 877  KFSISNSNAQSWVLTTYLDEDLRISRADAGSVFVFIREGSPLLD 1008
            K     +   SW+LTTYLD+DLRISR D G +FV  REGS LL+
Sbjct: 333  KLPFPGNRGSSWLLTTYLDKDLRISRGD-GGLFVLAREGSSLLE 375


>sp|Q94KU5|PAP3_BRACM Plastid lipid-associated protein 3,
           chloroplastic OS=Brassica campestris GN=PAP3 PE=2 SV=1
          Length = 360

 Score =  176 bits (445), Expect(2) = 9e-52
 Identities = 83/182 (45%), Positives = 126/182 (69%)
 Frame = +3

Query: 336 LKKALVDSFYGTDRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVYTSF 515
           LK+ L D+ YGT+ G  A SE RAE++E++ QLEA NPT AP E   LL+  W+L+YT+F
Sbjct: 137 LKRCLADTVYGTELGFRAGSEVRAEVLEIVNQLEALNPTQAPVENPELLDGNWVLLYTAF 196

Query: 516 SGLFPLLSRGTLPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRV 695
           S L PLL+ G+ PL +V+ ISQ+ID+++ ++ NS   + P A  S S  A FEVR+P R+
Sbjct: 197 SELLPLLAAGSTPLLKVKSISQSIDTKSLSIDNSTTLSSPFADFSFSATASFEVRTPSRI 256

Query: 696 QIKFEEGVIGTPQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPX 875
           ++ F+EG +  P++  S+ LPE+V   GQ+I+LS  K  L+ +QD A+++++ IS QPP 
Sbjct: 257 EVSFKEGTLKPPEIKSSVDLPESVGVFGQEINLSFLKQSLNPLQDVAANISRAISGQPPL 316

Query: 876 EV 881
           ++
Sbjct: 317 KL 318



 Score = 50.4 bits (119), Expect(2) = 9e-52
 Identities = 25/44 (56%), Positives = 30/44 (68%)
 Frame = +1

Query: 877  KFSISNSNAQSWVLTTYLDEDLRISRADAGSVFVFIREGSPLLD 1008
            K     +   SW+LTTYLD+DLRISR D G +FV  REGS LL+
Sbjct: 317  KLPFPGNRGSSWLLTTYLDKDLRISRGD-GGLFVLAREGSSLLE 359


BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q0MQG3|NDUS2_PONPY NADH dehydrogenase [ubiquinone] iron-sulfur
           protein 2, mitochondrial OS=Pongo pygmaeus GN=NDUFS2
           PE=2 SV=1
          Length = 463

 Score =  290 bits (743), Expect = 5e-78
 Identities = 132/193 (68%), Positives = 157/193 (81%)
 Frame = +1

Query: 130 WAPDYEWIKQFEGPILLPPEEQDNLPPPLWMQRKPPFEKKIRNVTINFGPQHPAAHGVLR 309
           W PD EW +QF G ++ P +E  +  PP W   +PP +  ++N+T+NFGPQHPAAHGVLR
Sbjct: 37  WQPDVEWAQQFGGAVMYPSKETAHWKPPPWNDVEPPKDTIVKNMTLNFGPQHPAAHGVLR 96

Query: 310 LVLELDGETVMRADPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQAYSLAVE 489
           LV+EL GE V + DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQAYSLAVE
Sbjct: 97  LVMELSGEMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVE 156

Query: 490 KLLGLEAPIRAKYIRTMFAEVTRILNHCMFLGAHAMDVGALTPFLWLFEEREKMMEFYER 669
           KLL +  P RA++IR +F E+TR+LNH M +  HA+D+GA+TPF WLFEEREKM EFYER
Sbjct: 157 KLLNIRPPPRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREKMFEFYER 216

Query: 670 ASGARLHAAYVRP 708
            SGAR+HAAY+RP
Sbjct: 217 VSGARMHAAYIRP 229